Web15 jun. 2011 · The analyses performed by MEME-ChIP provide the user with a varied view of the binding and regulatory activity of the ChIP-ed TF, as well as the possible involvement of other DNA-binding TFs. Availability: MEME-ChIP is available as part of the MEME Suite at http://meme.nbcr.net. Publication types Web1 feb. 2024 · Anuraj Nayarisseri, Anushka Bhrdwaj, Arshiya Khan, Khushboo Sharma, Uzma Shaheen, Chandrabose Selvaraj, Mohammad Aqueel Khan, Rajaram Abhirami, Muthuraja Arun Pravin, Gurunathan Rubha Shri, Dhanjay Raje, Sanjeev Kumar Singh, Promoter–motif extraction from co-regulated genes and their relevance to co-expression using E. coli as …
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MEME-ChIP Bioinformatics
Web7 mei 2015 · The MEME Suite is a software toolkit for performing motif-based sequence analysis, which is valuable in a wide variety of scientific contexts. The MEME Suite … WebBWA-MEME: Faster BWA-MEM2 using learned-index. Contribute to kaist-ina/BWA-MEME development by creating an account on GitHub. BWA-MEME: Faster BWA-MEM2 using learned-index. ... BWA-MEME: BWA-MEM emulated with a machine learning approach, Bioinformatics, Volume 38, Issue 9, 1 May 2024, Pages 2404–2413, ... WebBioinformatics 23 (5):634-636). DNAbinder - employs two approaches to predict DNA-binding proteins (a) amino acid composition which allows for multiple sequences in fasta format, and (b) PSSM (Position-specific scoring matrix) which can only screen a single protein at a time. buckshooting string semi automatic rifle